once you have downloaded the entire show (i.e. bit-torrent light turns green) then you can simply drag and drop the FLAC files into a FLAC decoder (FLAC Frontend for PC and Xact for MAC). that way you'll have WAV files to burn to a CD. encoding FLACs to WMA is likely not a good idea. go to WAV first and then make your MP3...
both of these recording were made from the exact same location, just different gear. personally, i prefer schoeps to B&K, but no reason you can't d/l both.... :-)